Merge branch 'development' into 'master'

Update code-server and change packages

See merge request !49

keras3-cpu/Dockerfile

@@ -61,7 +61,7 @@ RUN mamba install --yes \
 USER root
 
 # install code-server and extensions
-ENV CODE_VERSION=4.100.3
+ENV CODE_VERSION=4.101.1
 RUN wget --no-hsts -q https://github.com/coder/code-server/releases/download/v$CODE_VERSION/code-server_${CODE_VERSION}_amd64.deb && \
     dpkg -i code-server_${CODE_VERSION}_amd64.deb && \
     rm -f code-server_${CODE_VERSION}_amd64.deb && \
@@ -90,17 +90,24 @@ USER ${NB_UID}
 RUN mamba install --yes \
     # system monitor
     'bpytop' \
+    # textdistance
+    'textdistance' \
     # umap + hdbscan
     'umap-learn' \
     'hdbscan' \
     # gradio
     'gradio' \
-    # optuna + plotly
+    # optuna + plotly + bokeh
     'optuna' \
     'plotly' \
-    # optional dependencies for pandas for read_html and to support Parquet files
+    'bokeh' \
+    # optional dependencies for pandas for read_html, read_excel and to support Parquet files
     'lxml' \
+    'openpyxl' \
     'pyarrow' \
+    'fastparquet' \
+    'pyogrio' \
+    'zstandard' \
     # geo
     'geemap' \
     'geopandas' \
@@ -110,9 +117,6 @@ RUN mamba install --yes \
     'networkx' \
     'pyvis' \
     'netgraph' \
-    # dependencies for gymnasium, install before gymnasium!
-    'swig' \
-    'moviepy' \
     # dependencies for jupyter-vscode-proxy (?)
     'rfc3339-validator' \
     'rfc3986-validator' \

keras3-gpu/Dockerfile

@@ -18,7 +18,7 @@ RUN apt-get update --yes && \
     apt-get clean && rm -rf /var/lib/apt/lists/*
 
 # install code-server and extensions
-ENV CODE_VERSION=4.100.3
+ENV CODE_VERSION=4.101.1
 RUN wget --no-hsts -q https://github.com/coder/code-server/releases/download/v$CODE_VERSION/code-server_${CODE_VERSION}_amd64.deb && \
     dpkg -i code-server_${CODE_VERSION}_amd64.deb && \
     rm -f code-server_${CODE_VERSION}_amd64.deb && \
@@ -45,17 +45,24 @@ USER ${NB_UID}
 RUN mamba install --yes \
     # system monitor
     'bpytop' \
+    # textdistance
+    'textdistance' \
     # umap + hdbscan
     'umap-learn' \
     'hdbscan' \
     # gradio
     'gradio' \
-    # optuna + plotly
+    # optuna + plotly + bokeh
     'optuna' \
     'plotly' \
-    # optional dependencies for pandas for read_html and to support Parquet files
+    'bokeh' \
+    # optional dependencies for pandas for read_html, read_excel and to support Parquet files
     'lxml' \
+    'openpyxl' \
     'pyarrow' \
+    'fastparquet' \
+    'pyogrio' \
+    'zstandard' \
     # geopandas
     'geopandas' \
     'pysal' \

pytorch-gpu/Dockerfile

@@ -18,7 +18,7 @@ RUN apt-get update --yes && \
     apt-get clean && rm -rf /var/lib/apt/lists/*
 
 # install code-server and extensions
-ENV CODE_VERSION=4.100.3
+ENV CODE_VERSION=4.101.1
 RUN wget --no-hsts -q https://github.com/coder/code-server/releases/download/v$CODE_VERSION/code-server_${CODE_VERSION}_amd64.deb && \
     dpkg -i code-server_${CODE_VERSION}_amd64.deb && \
     rm -f code-server_${CODE_VERSION}_amd64.deb && \
@@ -45,18 +45,24 @@ USER ${NB_UID}
 RUN mamba install --yes \
     # system monitor
     'bpytop' \
+    # textdistance
+    'textdistance' \
     # umap + hdbscan
     'umap-learn' \
     'hdbscan' \
     # gradio
     'gradio' \
-    # optuna + plotly
+    # optuna + plotly + bokeh
     'optuna' \
     'plotly' \
-    # optional dependencies for pandas for read_html and to support Parquet files
+    'bokeh' \
+    # optional dependencies for pandas for read_html, read_excel and to support Parquet files
     'lxml' \
+    'openpyxl' \
     'pyarrow' \
+    'fastparquet' \
     'pyogrio' \
+    'zstandard' \
     # geopandas
     'geopandas' \
     'pysal' \